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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818713.1_cds_XP_016499751.1_13643
CDS Infomation

[gene=LOC107818278] [db_xref=GeneID:107818278] [protein=beta-galactosidase 16-like isoform X1] [protein_id=XP_016499751.1] [location=join(1148..1333,1828..1923,2076..2188,2296..2362,2487..2579,3631..3774,4447..4541,4625..4733,4865..4949,5019..5137,5254..5418,5665..5846,6034..6128,6749..6858,7256..7360,7859..7960,8157..8302,8495..8620,9574..9583)] [gbkey=CDS]
Sequence

ATGAAAATGCAGTGGCTATGGCGGAATTGGTTGGCAGCAGCGGCAGTACTATTGGTGGTC
ATAGCGGCGGCGTCGGCGTCTGCTGGCGGCGGAAATGTGAGTTATGACGGAAGGTCGTTG
ATAATTGATGGGCAAAGGAAGATGTTGTTTTCTGGTTCTATTCACTATCCTCGAAGCACT
CCTGATATGTGGCCATCTCTAATATCAAAAGCTAAAGAAGGTGGGATAGATGTGATTGAG
ACCTATGTTTTTTGGAACCTTCACGAATCCCAACCTGGACAGTACGATTTCAGCGGAAGG
CGTGACATAGTAGCATTTATTAAACAAATTCAAGCACAAGGTCTCTATGCCTGCCTTCGC
ATTGGACCCTATATTGAGGGAGAATGGACTTACGGAGGTTTTCCCTTTTGGTTACGTGAT
GTCCCTGGCATTGTCTTTCGCTCAAATAACGAACCCTTCAAGTTGTACATGCAAAACTTC
ACAACAAAAATAGTGAACCTGATGAAATCAGAAGGATTGTATGCTTCACAAGGAGGCCCA
ATCATACTCTCCCAGATTGAGAATGAATATCAAAATGTAGAAAAAGCATTCGGAGAAAAT
GGGCCACCTTATGTCCTTTGGGCAGCACAGATGGCTGTGGAACTTCAAACTGGGGTGCCA
TGGTGCATGTGCAAGCAAGATGATGCTCCTGATCCTGTTATTAATGCATGCAATGGGTTG
AGATGTGGAGAAACATTTGTAGGACCTAATTCACCAAACAAGCCTTCAATCTGGACAGAG
AACTGGACAAGCTTCTATCAAGTCTATGGTCAGAATGCAACACTCAGATCAGCAGAAGAC
ATAGCATATCATGTTGCCCTGTTCATTGCGAGGAAGAATGGAACCTTCATCAACTATTAC
ATGTATCATGGAGGAACCAATTTTGGCAGGACTGCTGCTGAATTTATGATAACAAGTTAC
TATGATCAAGCTCCGTTAGATGAGTATGGTTTAATCAGACAACCAAAATGGGGACATCTG
AAAGAGTTACATGCTGCGGTTAAGTTATGCTCAGAGACCATACTTTCTGTATTCCCCTCC
ATGCAGTCCTTAGGTGAACAACAAGAGGCTTATGTATTCAGTGGAGATTCTGGAGCTTGT
GCAGCATTTCTAGTGAACATAGATAACAGAAAAAGTGTACTAGTACAGTTTCAAAATTCG
TCATATGAGTTACCTCGGCAATCTATAAGCATCTTACCTGACTGCAAGACTGTATCCTTC
AATACGGCAAAGGTAAGCACACAATTCAGCACAAGAACAGCATTACCTGCTGTTCAGTTT
GATGCAGCTGAGAAATGGGAACAATTTCAAGAGGTCATCCCGCAACTTGATGCTACTTCA
CTGAGATCAGACATATTACTGGAGCACATGAATACTACAAAGGATGTATCTGATTATCTT
TGGTACACTTCCAGTATCCAGCAGGATTTGCCGGACCAGCAGTCAGTTACACTAAGTGTG
AAGTCCTTAGGCCATGTTTTACATGCTTTTGTGAATAGAGAACATGCAGGTTCTGCACAT
GGACAATTCAGAAATACATCATTTACTTTAGAGAGCACTATTTCTCTAAATAAAGGGACA
AACAACATCTCATTACTAAGTGCAACTGTTGGCTTACCGGATTCAGGATCATTTCTTGAA
CATAGGGCTCTTGGTGTACAGTCAGTAATTATTCAAGACAACAGCGAGGCTAAAAATATC
ACCAATTACTCATGGGGTTATCAGGTTGGATTATTGGGGGAGAAGTTACAAATTTACTCA
TCTGAAGGATCAAAGAGTGCTAATTGGAGCAGCTTAAGCTCTTCTCAACCGCTCACATGG
TACAAGTCAGCTTTTGATGCACCCGAGGGTGATGATCCTATTGCATTAAACCTTGGCTCC
ATGGGAAAAGGTGAAGCTTGGGTTAATGGCCAAAGCATCGGCCGATATTGGGTCTCCTTT
CGAACACTTGCAGGCATTCCATCACAAACTTGGTACAAAGTTCCAAGATCATTTCTCCAA
CCAGGAGACAACTTATTAGTCTTATTCGAGGAGGAAACTGGCAACCCTCTTGACATCACT
GTAGATACTATTTCAGTCACAAAGCCGTCATTGAGAAAGCTTGTCTAG

Peptide Sequence

PEP ID

XP_016499751.1
PEP Infomation

PREDICTED: beta-galactosidase 16-like isoform X1 [Nicotiana tabacum]
Sequence

MKMQWLWRNWLAAAAVLLVVIAAASASAGGGNVSYDGRSLIIDGQRKMLFSGSIHYPRST
PDMWPSLISKAKEGGIDVIETYVFWNLHESQPGQYDFSGRRDIVAFIKQIQAQGLYACLR
IGPYIEGEWTYGGFPFWLRDVPGIVFRSNNEPFKLYMQNFTTKIVNLMKSEGLYASQGGP
IILSQIENEYQNVEKAFGENGPPYVLWAAQMAVELQTGVPWCMCKQDDAPDPVINACNGL
RCGETFVGPNSPNKPSIWTENWTSFYQVYGQNATLRSAEDIAYHVALFIARKNGTFINYY
MYHGGTNFGRTAAEFMITSYYDQAPLDEYGLIRQPKWGHLKELHAAVKLCSETILSVFPS
MQSLGEQQEAYVFSGDSGACAAFLVNIDNRKSVLVQFQNSSYELPRQSISILPDCKTVSF
NTAKVSTQFSTRTALPAVQFDAAEKWEQFQEVIPQLDATSLRSDILLEHMNTTKDVSDYL
WYTSSIQQDLPDQQSVTLSVKSLGHVLHAFVNREHAGSAHGQFRNTSFTLESTISLNKGT
NNISLLSATVGLPDSGSFLEHRALGVQSVIIQDNSEAKNITNYSWGYQVGLLGEKLQIYS
SEGSKSANWSSLSSSQPLTWYKSAFDAPEGDDPIALNLGSMGKGEAWVNGQSIGRYWVSF
RTLAGIPSQTWYKVPRSFLQPGDNLLVLFEEETGNPLDITVDTISVTKPSLRKLV

Transcript Sequence

Gene sequence data has not been registered.